miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus



ABOUT THIS RECORD

ID: MNEST032043
species: Mus musculus
miRNA family: mir-374
source: miRBase, original name: mmu-mir-374c (MI0014108)

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATAATACAACCTGCTAAGTG

miRNA*
CTTAGCAGGTTGTATTATAT

mismatches: 0
bulges: 0

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pre-miRNA
GATAATACAACCTGCTAAGTGCTAGAACACTTAGCAGGTTGTATTATAT

dot-bracket secondary structure
.((((((((((((((((((((......))))))))))))))))))))..


SIMILARITIES
miRBase mmu-mir-374: 6e-22

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-374: 1e-20

Identical with: mmu-mir-374 from miRBase (MNEST032042)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP, Genes Dev. 24:992-1009(2010)., "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes"




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